IL_3V2F_040
3D structure
- PDB id
- 3V2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of YfiA bound to the 70S ribosome. This PDB entry contains coordinates for the 50S subunit of the 2nd ribosome in the ASU
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 3V2F|1|A|U|1026, 3V2F|1|A|A|1127, 3V2F|1|A|U|1130
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33964.1
- Basepair signature
- cWW-tWW-L-tWH-R-R-R-R-R-R-R-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
3V2F|1|A|G|1024
3V2F|1|A|G|1025
3V2F|1|A|U|1026
3V2F|1|A|A|1027
3V2F|1|A|A|1028
3V2F|1|A|A|1029
3V2F|1|A|G|1030
*
3V2F|1|A|C|1124
3V2F|1|A|G|1125
3V2F|1|A|A|1126
3V2F|1|A|A|1127
3V2F|1|A|A|1128
3V2F|1|A|A|1129
3V2F|1|A|U|1130
3V2F|1|A|G|1131
3V2F|1|A|A|1132
3V2F|1|A|U|1133
3V2F|1|A|C|1135
3V2F|1|A|G|1136
3V2F|1|A|G|1137
3V2F|1|A|G|1138
3V2F|1|A|G|1139
3V2F|1|A|C|1140
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain B
- 5S Ribosomal RNA
- Chain E
- 50S Ribosomal Protein L3
- Chain N
- 50S Ribosomal Protein L13
- Chain Q
- 50S Ribosomal Protein L16
Coloring options: