3D structure

PDB id
3V2F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of YfiA bound to the 70S ribosome. This PDB entry contains coordinates for the 50S subunit of the 2nd ribosome in the ASU
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
GGAA*UC
Length
6 nucleotides
Bulged bases
None detected
QA status
QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_39199.4
Basepair signature
cWW-tHS-cSH-cWW
Number of instances in this motif group
53

Unit IDs

3V2F|1|A|G|1666
3V2F|1|A|G|1667
3V2F|1|A|A|1668
3V2F|1|A|A|1669
*
3V2F|1|A|U|1993
3V2F|1|A|C|1994

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain E
50S Ribosomal Protein L3
Chain O
50S Ribosomal Protein L14

Coloring options:

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