3D structure

PDB id
429D (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CCGAGC*GGAG
Length
10 nucleotides
Bulged bases (A, C, G, U)
124G
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_74753.1
Basepair signature
cWW-cWW-R-cWW
Number of instances in this motif group
6

Unit IDs

429D|1|C|C|122
429D|1|C|C|123
429D|1|C|G|124
429D|1|C|A|125
429D|1|C|G|126
429D|1|C|C|127
*
429D|1|D|G|143
429D|1|D|G|144
429D|1|D|A|145
429D|1|D|G|146

Current chains

Chain C
RNA (5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3')
Chain D
RNA (5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3')

Nearby chains

No other chains within 10Å

Coloring options:

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