IL_4A1B_057
3D structure
- PDB id
- 4A1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- CUCAUCAG*CUGAAG
- Length
- 14 nucleotides
- Bulged bases
- 4A1B|1|1|U|1218, 4A1B|1|1|C|1219, 4A1B|1|1|G|1343, 4A1B|1|1|A|1345
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_40053.2
- Basepair signature
- cWW-tWW-L-tWW-tWH-cWW
- Number of instances in this motif group
- 4
Unit IDs
4A1B|1|1|C|1214
4A1B|1|1|U|1215
4A1B|1|1|C|1216
4A1B|1|1|A|1217
4A1B|1|1|U|1218
4A1B|1|1|C|1219
4A1B|1|1|A|1220
4A1B|1|1|G|1221
*
4A1B|1|1|C|1341
4A1B|1|1|U|1342
4A1B|1|1|G|1343
4A1B|1|1|A|1344
4A1B|1|1|A|1345
4A1B|1|1|G|1346
Current chains
- Chain 1
- 26S RRNA
Nearby chains
- Chain F
- RPL14
- Chain K
- UBIQUITIN-60S RIBOSOMAL PROTEIN L40
- Chain X
- RPL18A
Coloring options: