IL_4A2I_010
3D structure
- PDB id
- 4A2I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 16.5 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4A2I_010 not in the Motif Atlas
- Homologous match to IL_5J7L_010
- Geometric discrepancy: 0.085
- The information below is about IL_5J7L_010
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- Minor groove platform related
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4A2I|1|A|C|132
4A2I|1|A|U|133
4A2I|1|A|G|134
4A2I|1|A|C|135
4A2I|1|A|C|136
*
4A2I|1|A|G|227
4A2I|1|A|A|228
4A2I|1|A|U|229
4A2I|1|A|G|230
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain P
- 30S RIBOSOMAL PROTEIN S16
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: