IL_4ADV_003
3D structure
- PDB id
- 4ADV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- CCUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 4ADV|1|A|C|48, 4ADV|1|A|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4ADV_003 not in the Motif Atlas
- Homologous match to IL_5J7L_003
- Geometric discrepancy: 0.0898
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4ADV|1|A|C|47
4ADV|1|A|C|48
4ADV|1|A|U|49
4ADV|1|A|A|50
4ADV|1|A|A|51
4ADV|1|A|C|52
*
4ADV|1|A|G|359
4ADV|1|A|G|360
4ADV|1|A|G|361
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain L
- 30S RIBOSOMAL PROTEIN S12
Coloring options: