IL_4ADV_029
3D structure
- PDB id
- 4ADV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 4ADV|1|A|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4ADV_029 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.0777
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
4ADV|1|A|C|569
4ADV|1|A|G|570
4ADV|1|A|U|571
4ADV|1|A|A|572
4ADV|1|A|A|573
4ADV|1|A|A|574
4ADV|1|A|G|575
*
4ADV|1|A|C|880
4ADV|1|A|G|881
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
Coloring options: