IL_4B3S_066

3D structure

PDB id

4B3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosome in complex with compound 37

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GAUG*CUAAUC

Length

10 nucleotides

Bulged bases

4B3S|1|A|U|1257, 4B3S|1|A|U|1278, 4B3S|1|A|A|1280, 4B3S|1|A|U|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4B3S_066 not in the Motif Atlas

Homologous match to IL_4LFB_052

Geometric discrepancy: 0.4315

The information below is about IL_4LFB_052

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

4B3S|1|A|G|1255
4B3S|1|A|A|1256
4B3S|1|A|U|1257
4B3S|1|A|G|1258
*
4B3S|1|A|C|1277
4B3S|1|A|U|1278
4B3S|1|A|A|1279
4B3S|1|A|A|1280
4B3S|1|A|U|1281
4B3S|1|A|C|1282

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain C

30S RIBOSOMAL PROTEIN S3

Chain J

30S RIBOSOMAL PROTEIN S10

Chain N

30S RIBOSOMAL PROTEIN S14 TYPE Z