IL_4B3T_054

3D structure

PDB id

4B3T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosome in complex with compound 39

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4B3T|1|A|C|1400, 4B3T|1|A|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4B3T_054 not in the Motif Atlas

Geometric match to IL_4V88_463

Geometric discrepancy: 0.2018

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

4B3T|1|A|C|1399
4B3T|1|A|C|1400
4B3T|1|A|G|1401
*
4B3T|1|A|C|1501
4B3T|1|A|A|1502
4B3T|1|A|A|1503
4B3T|1|A|G|1504

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain W

5'-R(*UP*UP*CP*AP*AP*AP)-3'