IL_4BPP_047

3D structure

PDB id

4BPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A - Complex 4

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

AGUCAG*CUUGGAUUU

Length

15 nucleotides

Bulged bases

4BPP|1|A|G|891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37400.1

Basepair signature

cWW-L-R-R-L-tWH-tHS-tSS-tSS-R-cWW

Number of instances in this motif group

2

Unit IDs

4BPP|1|A|A|872
4BPP|1|A|G|873
4BPP|1|A|U|874
4BPP|1|A|C|875
4BPP|1|A|A|876
4BPP|1|A|G|877
*
4BPP|1|A|C|888
4BPP|1|A|U|889
4BPP|1|A|U|890
4BPP|1|A|G|891
4BPP|1|A|G|892
4BPP|1|A|A|893
4BPP|1|A|U|894
4BPP|1|A|U|895
4BPP|1|A|U|896

Current chains

Chain A

18S RRNA

Nearby chains

Chain 4

40S RIBOSOMAL PROTEIN S3A

Chain K

40S RIBOSOMAL PROTEIN RPS14E