IL_4BPP_052

3D structure

PDB id

4BPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A - Complex 4

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GAAGUAUG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_95652.6

Basepair signature

cWW-R-tSH-tHW-cSH-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

4BPP|1|A|G|1083
4BPP|1|A|A|1084
4BPP|1|A|A|1085
4BPP|1|A|G|1086
4BPP|1|A|U|1087
4BPP|1|A|A|1088
4BPP|1|A|U|1089
4BPP|1|A|G|1090
*
4BPP|1|A|U|1102
4BPP|1|A|G|1103
4BPP|1|A|A|1104
4BPP|1|A|A|1105
4BPP|1|A|A|1106
4BPP|1|A|C|1107

Current chains

Chain A

18S RRNA

Nearby chains

Chain L

40S RIBOSOMAL PROTEIN S12