IL_4BPP_081

3D structure

PDB id

4BPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A - Complex 4

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19986.2

Basepair signature

cWW-cWW-cSW-cWW-cSH-cWW

Number of instances in this motif group

15

Unit IDs

4BPP|1|A|G|1610
4BPP|1|A|C|1611
4BPP|1|A|C|1612
4BPP|1|A|C|1613
*
4BPP|1|A|G|1713
4BPP|1|A|U|1714
4BPP|1|A|A|1715
4BPP|1|A|A|1716
4BPP|1|A|C|1717

Current chains

Chain A

18S RRNA

Nearby chains

Chain F

EIF1