IL_4BTS_027
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GAG*CGAGGAAC
- Length
- 11 nucleotides
- Bulged bases
- 4BTS|1|AA|A|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_027 not in the Motif Atlas
- Geometric match to IL_7RQB_082
- Geometric discrepancy: 0.3614
- The information below is about IL_7RQB_082
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.7
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4BTS|1|AA|G|507
4BTS|1|AA|A|508
4BTS|1|AA|G|509
*
4BTS|1|AA|C|529
4BTS|1|AA|G|530
4BTS|1|AA|A|531
4BTS|1|AA|G|532
4BTS|1|AA|G|533
4BTS|1|AA|A|534
4BTS|1|AA|A|535
4BTS|1|AA|C|536
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain AD
- 40S RIBOSOMAL PROTEIN RPS9E
- Chain AP
- 40S RIBOSOMAL PROTEIN S24
- Chain AX
- 40S RIBOSOMAL PROTEIN RPS30E
- Chain CU
- 40S RIBOSOMAL PROTEIN RPS12E
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