IL_4BTS_048
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 4BTS|1|AA|C|1068, 4BTS|1|AA|U|1070, 4BTS|1|AA|G|1072
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_048 not in the Motif Atlas
- Homologous match to IL_4V88_437
- Geometric discrepancy: 0.1071
- The information below is about IL_4V88_437
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62898.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4BTS|1|AA|C|1012
4BTS|1|AA|G|1013
4BTS|1|AA|A|1014
*
4BTS|1|AA|U|1067
4BTS|1|AA|C|1068
4BTS|1|AA|U|1069
4BTS|1|AA|U|1070
4BTS|1|AA|U|1071
4BTS|1|AA|G|1072
4BTS|1|AA|G|1073
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain A6
- 40S RIBOSOMAL PROTEIN S27
- Chain AE
- 40S RIBOSOMAL PROTEIN RPS2E
- Chain AH
- 40S RIBOSOMAL PROTEIN RPS22E
- Chain AL
- 40S RIBOSOMAL PROTEIN S12
- Chain AO
- 40S RIBOSOMAL PROTEIN RPS13E
- Chain AQ
- 40S RIBOSOMAL PROTEIN RPS11E
Coloring options: