Motif IL_62898.1 Version IL_62898.1 of this group appears in releases 3.88 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_443 | 8C3A | 0.0000 | 3 | CM | SSU rRNA | U | 1080 | U | 1082 | U | 1084 | G | 1086 | * | C | 1019 | G | 1020 | A | 1021 | cWW | cWW |
| 2 | IL_4V88_437 | 4V88 | 0.0971 | 3 | A6 | SSU rRNA | U | 1095 | U | 1097 | U | 1099 | G | 1101 | * | C | 1034 | G | 1035 | A | 1036 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUUGG*CGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUG*G | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: