IL_4BTS_072

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

4BTS|1|AA|U|1365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_072 not in the Motif Atlas

Geometric match to IL_3MEI_001

Geometric discrepancy: 0.2634

The information below is about IL_3MEI_001

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

4BTS|1|AA|G|1364
4BTS|1|AA|U|1365
4BTS|1|AA|G|1366
*
4BTS|1|AA|C|1374
4BTS|1|AA|C|1375

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A1

40S RIBOSOMAL PROTEIN RPS28E

Chain AG

40S RIBOSOMAL PROTEIN RPS5E

Chain AR

40S RIBOSOMAL PROTEIN RACK1

Chain AV

40S RIBOSOMAL PROTEIN RPS17E