IL_4BTS_095

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUUA*UUUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_095 not in the Motif Atlas

Homologous match to IL_4V88_391

Geometric discrepancy: 0.0905

The information below is about IL_4V88_391

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

4BTS|1|BA|G|105
4BTS|1|BA|U|106
4BTS|1|BA|U|107
4BTS|1|BA|A|108
*
4BTS|1|BA|U|293
4BTS|1|BA|U|294
4BTS|1|BA|U|295
4BTS|1|BA|C|296

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain B2

40S RIBOSOMAL PROTEIN S8

Chain BQ

40S RIBOSOMAL PROTEIN RPS11E

Chain BW

40S RIBOSOMAL PROTEIN RPS4E