IL_4BTS_098
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 4BTS|1|BA|U|164
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_098 not in the Motif Atlas
- Homologous match to IL_4V88_394
- Geometric discrepancy: 0.1067
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
4BTS|1|BA|G|137
4BTS|1|BA|G|138
4BTS|1|BA|A|139
4BTS|1|BA|U|140
4BTS|1|BA|A|141
4BTS|1|BA|A|142
4BTS|1|BA|C|143
*
4BTS|1|BA|G|159
4BTS|1|BA|C|160
4BTS|1|BA|U|161
4BTS|1|BA|A|162
4BTS|1|BA|A|163
4BTS|1|BA|U|164
4BTS|1|BA|A|165
4BTS|1|BA|C|166
Current chains
- Chain BA
- 18S ribosomal RNA
Nearby chains
- Chain BP
- 40S RIBOSOMAL PROTEIN S24
- Chain BY
- 40S RIBOSOMAL PROTEIN S6
Coloring options: