IL_4BTS_117
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- AGGGCAAG*CU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_117 not in the Motif Atlas
- Geometric match to IL_4V88_413
- Geometric discrepancy: 0.0838
- The information below is about IL_4V88_413
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.1
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 10
Unit IDs
4BTS|1|BA|A|543
4BTS|1|BA|G|544
4BTS|1|BA|G|545
4BTS|1|BA|G|546
4BTS|1|BA|C|547
4BTS|1|BA|A|548
4BTS|1|BA|A|549
4BTS|1|BA|G|550
*
4BTS|1|BA|C|581
4BTS|1|BA|U|582
Current chains
- Chain BA
- 18S ribosomal RNA
Nearby chains
- Chain BD
- 40S RIBOSOMAL PROTEIN RPS9E
- Chain BE
- 40S RIBOSOMAL PROTEIN RPS2E
- Chain BX
- 40S RIBOSOMAL PROTEIN RPS30E
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