IL_4BTS_132

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUAUU*AGGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_132 not in the Motif Atlas

Geometric match to IL_5TBW_121

Geometric discrepancy: 0.3928

The information below is about IL_5TBW_121

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

4BTS|1|BA|G|863
4BTS|1|BA|U|864
4BTS|1|BA|A|865
4BTS|1|BA|U|866
4BTS|1|BA|U|867
*
4BTS|1|BA|A|901
4BTS|1|BA|G|902
4BTS|1|BA|G|903
4BTS|1|BA|A|904
4BTS|1|BA|C|905

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain B4

40S RIBOSOMAL PROTEIN S3A

Chain B5

40S RIBOSOMAL PROTEIN RPS26E

Chain BK

40S RIBOSOMAL PROTEIN RPS14E