IL_4BTS_135
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_135 not in the Motif Atlas
- Geometric match to IL_4LFB_033
- Geometric discrepancy: 0.0743
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
4BTS|1|BA|C|968
4BTS|1|BA|A|969
4BTS|1|BA|A|970
4BTS|1|BA|A|971
4BTS|1|BA|G|972
*
4BTS|1|BA|C|988
4BTS|1|BA|G|989
4BTS|1|BA|U|990
4BTS|1|BA|A|991
4BTS|1|BA|G|992
Current chains
- Chain BA
- 18S ribosomal RNA
Nearby chains
- Chain BK
- 40S RIBOSOMAL PROTEIN RPS14E
Coloring options: