IL_4BTS_170

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UAAC*GGAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_170 not in the Motif Atlas

Homologous match to IL_4V88_468

Geometric discrepancy: 0.2603

The information below is about IL_4V88_468

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.12

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

35

Unit IDs

4BTS|1|BA|U|1625
4BTS|1|BA|A|1626
4BTS|1|BA|A|1627
4BTS|1|BA|C|1628
*
4BTS|1|BA|G|1697
4BTS|1|BA|G|1698
4BTS|1|BA|A|1699
4BTS|1|BA|A|1700

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain BL

40S RIBOSOMAL PROTEIN S12