IL_4BTS_171

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UCUG*CCUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_171 not in the Motif Atlas

Geometric match to IL_5TBW_129

Geometric discrepancy: 0.185

The information below is about IL_5TBW_129

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

4BTS|1|BA|U|1635
4BTS|1|BA|C|1636
4BTS|1|BA|U|1637
4BTS|1|BA|G|1638
*
4BTS|1|BA|C|1687
4BTS|1|BA|C|1688
4BTS|1|BA|U|1689
4BTS|1|BA|A|1690

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain B2

40S RIBOSOMAL PROTEIN S8