IL_4BTS_175

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UGGAC*GAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_175 not in the Motif Atlas

Geometric match to IL_7RQB_075

Geometric discrepancy: 0.1467

The information below is about IL_7RQB_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

4BTS|1|BA|U|1649
4BTS|1|BA|G|1650
4BTS|1|BA|G|1651
4BTS|1|BA|A|1652
4BTS|1|BA|C|1653
*
4BTS|1|BA|G|1672
4BTS|1|BA|A|1673
4BTS|1|BA|A|1674
4BTS|1|BA|A|1675
4BTS|1|BA|A|1676

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain B2

40S RIBOSOMAL PROTEIN S8

Chain BY

40S RIBOSOMAL PROTEIN S6