IL_4BTS_194

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GAG*CGAUUC

Length

9 nucleotides

Bulged bases

4BTS|1|CA|U|371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_194 not in the Motif Atlas

Homologous match to IL_4V88_404

Geometric discrepancy: 0.0871

The information below is about IL_4V88_404

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_11347.3

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

4BTS|1|CA|G|354
4BTS|1|CA|A|355
4BTS|1|CA|G|356
*
4BTS|1|CA|C|367
4BTS|1|CA|G|368
4BTS|1|CA|A|369
4BTS|1|CA|U|370
4BTS|1|CA|U|371
4BTS|1|CA|C|372

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CD

40S RIBOSOMAL PROTEIN RPS9E

Chain CL

40S RIBOSOMAL PROTEIN S12

Chain CW

40S RIBOSOMAL PROTEIN RPS4E