3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
AUUUC*GUGU
Length
9 nucleotides
Bulged bases
4BTS|1|CA|U|648
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4BTS_212 not in the Motif Atlas
Geometric match to IL_3R2D_002
Geometric discrepancy: 0.2767
The information below is about IL_3R2D_002
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_77658.1
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
34

Unit IDs

4BTS|1|CA|A|646
4BTS|1|CA|U|647
4BTS|1|CA|U|648
4BTS|1|CA|U|649
4BTS|1|CA|C|650
*
4BTS|1|CA|G|659
4BTS|1|CA|U|660
4BTS|1|CA|G|661
4BTS|1|CA|U|662

Current chains

Chain CA
18S ribosomal RNA

Nearby chains

Chain CZ
40S RIBOSOMAL PROTEIN RPS21E

Coloring options:


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