IL_4BTS_325

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UGG*UCUGUGA

Length

10 nucleotides

Bulged bases

4BTS|1|DA|C|1402, 4BTS|1|DA|U|1403, 4BTS|1|DA|G|1406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31361.1

Basepair signature

cWW-L-R-tSH-cWW

Number of instances in this motif group

12

Unit IDs

4BTS|1|DA|U|1248
4BTS|1|DA|G|1249
4BTS|1|DA|G|1250
*
4BTS|1|DA|U|1401
4BTS|1|DA|C|1402
4BTS|1|DA|U|1403
4BTS|1|DA|G|1404
4BTS|1|DA|U|1405
4BTS|1|DA|G|1406
4BTS|1|DA|A|1407

Current chains

Chain DA

18S ribosomal RNA

Nearby chains

Chain D7

40S RIBOSOMAL PROTEIN RPS10E

Chain D9

40S RIBOSOMAL PROTEIN RPS31E

Chain DC

40S RIBOSOMAL PROTEIN RPS3E

Chain DJ

40S RIBOSOMAL PROTEIN RPS20E

Chain DN

40S RIBOSOMAL PROTEIN RPS29E