IL_4BTS_368

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUCAG*CUUGGAUU

Length

13 nucleotides

Bulged bases

4BTS|1|CA|G|891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_368 not in the Motif Atlas

Geometric match to IL_4V88_434

Geometric discrepancy: 0.1501

The information below is about IL_4V88_434

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_45067.5

Basepair signature

cWW-tSH-tSS-tHS-R-cWW-cWW-R

Number of instances in this motif group

16

Unit IDs

4BTS|1|CA|G|873
4BTS|1|CA|U|874
4BTS|1|CA|C|875
4BTS|1|CA|A|876
4BTS|1|CA|G|877
*
4BTS|1|CA|C|888
4BTS|1|CA|U|889
4BTS|1|CA|U|890
4BTS|1|CA|G|891
4BTS|1|CA|G|892
4BTS|1|CA|A|893
4BTS|1|CA|U|894
4BTS|1|CA|U|895

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain C4

40S RIBOSOMAL PROTEIN S3A

Chain CK

40S RIBOSOMAL PROTEIN RPS14E