IL_4BTS_393

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

ACA*UU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_393 not in the Motif Atlas

Homologous match to IL_8P9A_401

Geometric discrepancy: 0.1661

The information below is about IL_8P9A_401

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

4BTS|1|DA|A|511
4BTS|1|DA|C|512
4BTS|1|DA|A|513
*
4BTS|1|DA|U|525
4BTS|1|DA|U|526

Current chains

Chain DA

18S ribosomal RNA

Nearby chains

Chain DD

40S RIBOSOMAL PROTEIN RPS9E

Chain DP

40S RIBOSOMAL PROTEIN S24