IL_4CSU_013
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_013 not in the Motif Atlas
- Homologous match to IL_5J7L_250
- Geometric discrepancy: 0.1314
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4CSU|1|B|G|188
4CSU|1|B|G|189
4CSU|1|B|A|190
4CSU|1|B|A|191
4CSU|1|B|C|192
4CSU|1|B|U|193
4CSU|1|B|G|194
*
4CSU|1|B|C|201
4CSU|1|B|U|202
4CSU|1|B|A|203
4CSU|1|B|A|204
4CSU|1|B|G|205
4CSU|1|B|U|206
4CSU|1|B|A|207
4CSU|1|B|C|208
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L28
- Chain L
- 50S RIBOSOMAL PROTEIN L15
Coloring options: