IL_4CSU_034
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GA*UGC
- Length
- 5 nucleotides
- Bulged bases
- 4CSU|1|B|G|914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_034 not in the Motif Atlas
- Geometric match to IL_5J7L_271
- Geometric discrepancy: 0.1949
- The information below is about IL_5J7L_271
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
4CSU|1|B|G|862
4CSU|1|B|A|863
*
4CSU|1|B|U|913
4CSU|1|B|G|914
4CSU|1|B|C|915
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain A
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S RIBOSOMAL PROTEIN L16
- Chain W
- 50S RIBOSOMAL PROTEIN L25
- Chain Y
- 50S RIBOSOMAL PROTEIN L27
Coloring options: