IL_4CSU_081
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 4CSU|1|B|A|1938, 4CSU|1|B|U|1944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_081 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.4495
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
4CSU|1|B|C|1934
4CSU|1|B|G|1935
4CSU|1|B|A|1936
4CSU|1|B|A|1937
4CSU|1|B|A|1938
4CSU|1|B|U|1939
4CSU|1|B|U|1940
4CSU|1|B|C|1941
4CSU|1|B|C|1942
4CSU|1|B|U|1943
4CSU|1|B|U|1944
4CSU|1|B|G|1945
*
4CSU|1|B|C|1961
4CSU|1|B|C|1962
4CSU|1|B|U|1963
4CSU|1|B|G|1964
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 9
- GTPASE OBGE/CGTA
Coloring options: