IL_4CSU_083
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- ACG*CUAU
- Length
- 7 nucleotides
- Bulged bases
- 4CSU|1|B|C|2055, 4CSU|1|B|U|2613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4CSU_083 not in the Motif Atlas
- Geometric match to IL_5TBW_092
- Geometric discrepancy: 0.3945
- The information below is about IL_5TBW_092
- Detailed Annotation
- Major groove platform with intercalation
- Broad Annotation
- Major groove platform
- Motif group
- IL_54678.7
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4CSU|1|B|A|2054
4CSU|1|B|C|2055
4CSU|1|B|G|2056
*
4CSU|1|B|C|2612
4CSU|1|B|U|2613
4CSU|1|B|A|2614
4CSU|1|B|U|2615
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 3
- 50S RIBOSOMAL PROTEIN L32
- Chain 9
- GTPASE OBGE/CGTA
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: