IL_4CSU_092

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC

Length

33 nucleotides

Bulged bases

4CSU|1|B|U|2132, 4CSU|1|B|A|2163

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CSU|1|B|G|2124
4CSU|1|B|G|2125
4CSU|1|B|A|2126
4CSU|1|B|G|2127
4CSU|1|B|G|2128
4CSU|1|B|C|2129
4CSU|1|B|U|2130
4CSU|1|B|U|2131
4CSU|1|B|U|2132
4CSU|1|B|G|2133
4CSU|1|B|A|2134
4CSU|1|B|A|2135
4CSU|1|B|G|2136
*
4CSU|1|B|U|2155
4CSU|1|B|G|2156
4CSU|1|B|G|2157
4CSU|1|B|A|2158
4CSU|1|B|G|2159
4CSU|1|B|C|2160
4CSU|1|B|C|2161
4CSU|1|B|G|2162
4CSU|1|B|A|2163
4CSU|1|B|C|2164
4CSU|1|B|C|2165
4CSU|1|B|U|2166
4CSU|1|B|U|2167
4CSU|1|B|G|2168
4CSU|1|B|A|2169
4CSU|1|B|A|2170
4CSU|1|B|A|2171
4CSU|1|B|U|2172
4CSU|1|B|A|2173
4CSU|1|B|C|2174

Current chains

Chain B

23S RRNA

Nearby chains

Chain 5

50S RIBOSOMAL PROTEIN L1