IL_4CUV_066

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGACGAAG*UCGAA

Length

13 nucleotides

Bulged bases

4CUV|1|1|C|1391

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65553.12

Basepair signature

cWW-cSS-tSS-L-tSH-tSS-tHS-tHW-cWW-tHS-cWW

Number of instances in this motif group

29

Unit IDs

4CUV|1|1|U|1388
4CUV|1|1|G|1389
4CUV|1|1|A|1390
4CUV|1|1|C|1391
4CUV|1|1|G|1392
4CUV|1|1|A|1393
4CUV|1|1|A|1394
4CUV|1|1|G|1395
*
4CUV|1|1|U|1415
4CUV|1|1|C|1416
4CUV|1|1|G|1417
4CUV|1|1|A|1418
4CUV|1|1|A|1419

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S RRNA