IL_4CUV_068

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAGUAG*CGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49493.8

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

4CUV|1|1|G|1444
4CUV|1|1|U|1445
4CUV|1|1|A|1446
4CUV|1|1|G|1447
4CUV|1|1|U|1448
4CUV|1|1|A|1449
4CUV|1|1|G|1450
*
4CUV|1|1|C|2354
4CUV|1|1|G|2355
4CUV|1|1|A|2356
4CUV|1|1|A|2357
4CUV|1|1|A|2358
4CUV|1|1|C|2359

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S RRNA