IL_4CUV_072

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAUUCUUC*GGAAUAGUUUUC

Length

21 nucleotides

Bulged bases

4CUV|1|1|U|1629, 4CUV|1|1|U|1815, 4CUV|1|1|U|1820, 4CUV|1|1|U|1821

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00346.1

Basepair signature

cWW-L-R-R-R-L-L-cWW-L-R-R-R-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4CUV|1|1|G|1623
4CUV|1|1|G|1624
4CUV|1|1|A|1625
4CUV|1|1|U|1626
4CUV|1|1|U|1627
4CUV|1|1|C|1628
4CUV|1|1|U|1629
4CUV|1|1|U|1630
4CUV|1|1|C|1631
*
4CUV|1|1|G|1811
4CUV|1|1|G|1812
4CUV|1|1|A|1813
4CUV|1|1|A|1814
4CUV|1|1|U|1815
4CUV|1|1|A|1816
4CUV|1|1|G|1817
4CUV|1|1|U|1818
4CUV|1|1|U|1819
4CUV|1|1|U|1820
4CUV|1|1|U|1821
4CUV|1|1|C|1822

Current chains

Chain 1

25S RRNA

Nearby chains