IL_4CUV_135

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UACGAAUAAG*CGCUGAA

Length

17 nucleotides

Bulged bases

4CUV|1|1|A|3180, 4CUV|1|1|A|3186, 4CUV|1|1|U|3207, 4CUV|1|1|A|3209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_98172.1

Basepair signature

cWW-L-R-R-L-L-cSS-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

4CUV|1|1|U|3179
4CUV|1|1|A|3180
4CUV|1|1|C|3181
4CUV|1|1|G|3182
4CUV|1|1|A|3183
4CUV|1|1|A|3184
4CUV|1|1|U|3185
4CUV|1|1|A|3186
4CUV|1|1|A|3187
4CUV|1|1|G|3188
*
4CUV|1|1|C|3204
4CUV|1|1|G|3205
4CUV|1|1|C|3206
4CUV|1|1|U|3207
4CUV|1|1|G|3208
4CUV|1|1|A|3209
4CUV|1|1|A|3210

Current chains

Chain 1

25S RRNA

Nearby chains