IL_4CUV_160

3D structure

PDB id

4CUV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UU*AGUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4CUV_160 not in the Motif Atlas

Homologous match to IL_8GLP_012

Geometric discrepancy: 0.5416

The information below is about IL_8GLP_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48076.10

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

4CUV|1|1|U|177
4CUV|1|1|U|178
*
4CUV|1|1|A|238
4CUV|1|1|G|239
4CUV|1|1|U|240
4CUV|1|1|G|241

Current chains

Chain 1

25S RRNA

Nearby chains