IL_4CUX_011

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

4CUX|1|2|U|170

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86694.2

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

5

Unit IDs

4CUX|1|2|G|143
4CUX|1|2|U|144
4CUX|1|2|A|145
4CUX|1|2|U|146
4CUX|1|2|A|147
4CUX|1|2|A|148
4CUX|1|2|C|149
*
4CUX|1|2|G|165
4CUX|1|2|C|166
4CUX|1|2|U|167
4CUX|1|2|A|168
4CUX|1|2|A|169
4CUX|1|2|U|170
4CUX|1|2|A|171
4CUX|1|2|C|172

Current chains

Chain 2

18S RRNA

Nearby chains