IL_4CUX_060

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUAAGGA*UUU

Length

10 nucleotides

Bulged bases

4CUX|1|2|A|1227, 4CUX|1|2|G|1228, 4CUX|1|2|G|1229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48036.1

Basepair signature

cWW-L-R-L-L-L-cWW

Number of instances in this motif group

1

Unit IDs

4CUX|1|2|A|1224
4CUX|1|2|U|1225
4CUX|1|2|A|1226
4CUX|1|2|A|1227
4CUX|1|2|G|1228
4CUX|1|2|G|1229
4CUX|1|2|A|1230
*
4CUX|1|2|U|1257
4CUX|1|2|U|1258
4CUX|1|2|U|1259

Current chains

Chain 2

18S RRNA

Nearby chains