IL_4CUX_098

3D structure

PDB id

4CUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUA*UUUACGUUCCAGGAUG

Length

19 nucleotides

Bulged bases

4CUX|1|Z|U|6115, 4CUX|1|Z|A|6123

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58270.1

Basepair signature

cWW-L-R-R-R-R-R-R-R-R-R-R-R-R-R-R-cWW

Number of instances in this motif group

1

Unit IDs

4CUX|1|Z|U|6100
4CUX|1|Z|U|6101
4CUX|1|Z|A|6102
*
4CUX|1|Z|U|6113
4CUX|1|Z|U|6114
4CUX|1|Z|U|6115
4CUX|1|Z|A|6116
4CUX|1|Z|C|6117
4CUX|1|Z|G|6118
4CUX|1|Z|U|6119
4CUX|1|Z|U|6120
4CUX|1|Z|C|6121
4CUX|1|Z|C|6122
4CUX|1|Z|A|6123
4CUX|1|Z|G|6124
4CUX|1|Z|G|6125
4CUX|1|Z|A|6126
4CUX|1|Z|U|6127
4CUX|1|Z|G|6128

Current chains

Chain Z

RNA OF CRICKET-PARALYSIS-VIRUS-IRES

Nearby chains