IL_4CXE_204

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GACCUCAGAUCAGAC*GCCUGUCUGAGCGUC

Length

30 nucleotides

Bulged bases

4CXE|1|2|U|13, 4CXE|1|3|C|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|4
4CXE|1|2|A|5
4CXE|1|2|C|6
4CXE|1|2|C|7
4CXE|1|2|U|8
4CXE|1|2|C|9
4CXE|1|2|A|10
4CXE|1|2|G|11
4CXE|1|2|A|12
4CXE|1|2|U|13
4CXE|1|2|C|14
4CXE|1|2|A|15
4CXE|1|2|G|16
4CXE|1|2|A|17
4CXE|1|2|C|18
*
4CXE|1|3|G|139
4CXE|1|3|C|140
4CXE|1|3|C|141
4CXE|1|3|U|142
4CXE|1|3|G|143
4CXE|1|3|U|144
4CXE|1|3|C|145
4CXE|1|3|U|146
4CXE|1|3|G|147
4CXE|1|3|A|148
4CXE|1|3|G|149
4CXE|1|3|C|150
4CXE|1|3|G|151
4CXE|1|3|U|152
4CXE|1|3|C|153

Current chains

Chain 2

28S RRNA

Chain 3

5.8S RRNA

Nearby chains