IL_4CXE_209

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GGAUUCAACCC*GGGCGCAUU

Length

20 nucleotides

Bulged bases

4CXE|1|2|U|459, 4CXE|1|2|C|460, 4CXE|1|2|A|461, 4CXE|1|2|A|462, 4CXE|1|2|C|675, 4CXE|1|2|G|676, 4CXE|1|2|C|677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|455
4CXE|1|2|G|456
4CXE|1|2|A|457
4CXE|1|2|U|458
4CXE|1|2|U|459
4CXE|1|2|C|460
4CXE|1|2|A|461
4CXE|1|2|A|462
4CXE|1|2|C|463
4CXE|1|2|C|464
4CXE|1|2|C|465
*
4CXE|1|2|G|672
4CXE|1|2|G|673
4CXE|1|2|G|674
4CXE|1|2|C|675
4CXE|1|2|G|676
4CXE|1|2|C|677
4CXE|1|2|A|678
4CXE|1|2|U|679
4CXE|1|2|U|680

Current chains

Chain 2

28S RRNA

Nearby chains