IL_4CXE_216

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GGGG*CGCCGU

Length

10 nucleotides

Bulged bases

4CXE|1|2|G|1339, 4CXE|1|2|G|1357, 4CXE|1|2|C|1358, 4CXE|1|2|C|1359, 4CXE|1|2|G|1360

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|G|1338
4CXE|1|2|G|1339
4CXE|1|2|G|1340
4CXE|1|2|G|1341
*
4CXE|1|2|C|1356
4CXE|1|2|G|1357
4CXE|1|2|C|1358
4CXE|1|2|C|1359
4CXE|1|2|G|1360
4CXE|1|2|U|1361

Current chains

Chain 2

28S RRNA

Nearby chains