IL_4CXE_237

3D structure

PDB id

4CXE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CCUCGGAUAGC*GUGCGGAGUG

Length

21 nucleotides

Bulged bases

4CXE|1|2|U|4717, 4CXE|1|2|C|4718, 4CXE|1|2|G|4719, 4CXE|1|2|G|4724, 4CXE|1|2|G|4825, 4CXE|1|2|C|4826, 4CXE|1|2|A|4829, 4CXE|1|2|U|4831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CXE|1|2|C|4715
4CXE|1|2|C|4716
4CXE|1|2|U|4717
4CXE|1|2|C|4718
4CXE|1|2|G|4719
4CXE|1|2|G|4720
4CXE|1|2|A|4721
4CXE|1|2|U|4722
4CXE|1|2|A|4723
4CXE|1|2|G|4724
4CXE|1|2|C|4725
*
4CXE|1|2|G|4823
4CXE|1|2|U|4824
4CXE|1|2|G|4825
4CXE|1|2|C|4826
4CXE|1|2|G|4827
4CXE|1|2|G|4828
4CXE|1|2|A|4829
4CXE|1|2|G|4830
4CXE|1|2|U|4831
4CXE|1|2|G|4832

Current chains

Chain 2

28S RRNA

Nearby chains