IL_4DV0_049
3D structure
- PDB id
- 4DV0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.85 Å
Loop
- Sequence
- CCG*CUGG
- Length
- 7 nucleotides
- Bulged bases
- 4DV0|1|A|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4DV0_049 not in the Motif Atlas
- Geometric match to IL_3ICQ_003
- Geometric discrepancy: 0.2837
- The information below is about IL_3ICQ_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70707.3
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 70
Unit IDs
4DV0|1|A|C|1059
4DV0|1|A|C|1060
4DV0|1|A|G|1061
*
4DV0|1|A|C|1195
4DV0|1|A|U|1196
4DV0|1|A|G|1197
4DV0|1|A|G|1198
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- ribosomal protein S3
- Chain E
- ribosomal protein S5
- Chain I
- ribosomal protein S9
- Chain J
- ribosomal protein S10
- Chain N
- ribosomal protein S14
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