IL_4DV1_050
3D structure
- PDB id
- 4DV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G, bound with streptomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.85 Å
Loop
- Sequence
- CCG*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CCG,CGG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4DV1_050 not in the Motif Atlas
- Geometric match to IL_1NBS_006
- Geometric discrepancy: 0.2196
- The information below is about IL_1NBS_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4DV1|1|A|C|1118
4DV1|1|A|C|1119
4DV1|1|A|G|1120
*
4DV1|1|A|C|1153
4DV1|1|A|G|1154
4DV1|1|A|G|1155
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- ribosomal protein S9
- Chain J
- ribosomal protein S10
- Chain N
- ribosomal protein S14
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