IL_4DV7_039
3D structure
- PDB id
- 4DV7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.29 Å
Loop
- Sequence
- UGC*GCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UGC,GCA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4DV7_039 not in the Motif Atlas
- Geometric match to IL_3R1D_002
- Geometric discrepancy: 0.2422
- The information below is about IL_3R1D_002
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
4DV7|1|A|U|997
4DV7|1|A|G|998
4DV7|1|A|C|999
*
4DV7|1|A|G|1042
4DV7|1|A|C|1043
4DV7|1|A|A|1044
Current chains
- Chain A
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: