IL_4DV7_049

3D structure

PDB id

4DV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

CCC*GGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CCC,GGG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4DV7_049 not in the Motif Atlas

Geometric match to IL_5UNE_009

Geometric discrepancy: 0.2163

The information below is about IL_5UNE_009

Detailed Annotation

Isolated non-canonical cWW contact

Broad Annotation

No text annotation

Motif group

IL_44465.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

9

Unit IDs

4DV7|1|A|C|1161
4DV7|1|A|C|1162
4DV7|1|A|C|1163
*
4DV7|1|A|G|1173
4DV7|1|A|G|1174
4DV7|1|A|G|1175

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

ribosomal protein S7